Haplotypes (differences to the rCRS) were generated using freely available GEN-SNiP
Author(s) Year   # seqs Full sequences
(FASTA files)		 Haplotypes
(differences
to the rCRS)		 Remarks
Abu-Amero et al. 2007 publication 9 full sequences haplotypes
Abu-Amero et al. 2008 publication 7 full sequences haplotypes Sequences are incomplete.
Achilli et al. 2004 publication 62 full sequences haplotypes
Achilli et al. 2005 publication 39 full sequences haplotypes
Achilli et al. 2008 publication 15 full sequences haplotypes
Álvarez-Iglesias et al. 2009 publication 8 full sequences haplotypes
Amati-Bonneau et al. 2008 publication 1 full sequence haplotype
Anderson et al. / Andrews et al. 1981 / 1999 publications 1 full sequence =rCRS This is the revised Cambridge Reference Sequence (rCRS)
Annunen-Rasila et al. 2006 publication 77 full sequences haplotypes Coding region only (pos. 577-16023).
Argus Biosciences / Whyte 2007-2009 6 full sequences haplotypes
Arnason et al. 1996 publication 1 full sequence haplotype
Arnason et al. 2007 publication 2 full sequences haplotypes
Ballana et al. 2008 publication 2 full sequences haplotypes Not available in GenBank: sequences were inferred from haplotypes.
Bandelt et al. 2005 publication 2 full sequences haplotypes
Barik et al. 2008 publication 17 full sequences haplotypes
Behar et al. 2006 publication 30 full sequences haplotypes
Behar et al. 2008a publication 49 full sequences haplotypes
Behar et al. 2008b publication 309 full sequences haplotypes
Behar et al. 2008c publication 1 full sequence haplotype
Bilal et al. 2008 publication 112 full sequences haplotypes
Brisighelli et al. 2009 publication 9 full sequences haplotypes
Brown et al. 2001 publication 2 full sequences haplotypes
Carelli et al. 2006 publication 8 full sequences haplotypes
Černý et al. 2009 publication 16 full sequences haplotypes
Chandrasekar et al. 2009 publication 641 full sequences haplotypes
Chaubey et al. 2008 publication 35 full sequences haplotypes
Chevrollier et al. 2009 1 full sequence haplotype
Coble et al. 2004 publication 241 full sequences haplotypes
Costa et al. 2009 publication 43 full sequences haplotypes
Dancause et al. 2009 publication 2 full sequences haplotypes
D'Aurelio et al. 2009 publication 5 full sequences haplotypes
Derbeneva et al. 2002a publication 1 full sequence haplotype
Derbeneva et al. 2002b publication 38 full sequences haplotypes
Derenko et al. 2007 publication 71 full sequences haplotypes
Desquiret et al. 2009 1 full sequence haplotype
Detjen et al. 2007 publication 5 full sequences haplotypes
Dubut et al. 2009 3 full sequences haplotypes
Eaaswarkhanth et al. 2009 publication 12 full sequences haplotypes
Ennafaa et al. 2009 publication 6 full sequences haplotypes
Ermini et al. 2008 publication 1 full sequence haplotype
Fagundes et al. 2008 publication 58 full sequences haplotypes One sequence (accession EU095237) is coding region only (pos. 577-16023).
FamilyTreeDNA / Greenspan et al. 2006-2009 403 full sequences haplotypes
Feder et al. 2008 publication 16 full sequences haplotypes
Fendt et al. 2008 publication 10 full sequences haplotypes
Finnilä et al. 2001 publication 192 full sequences haplotypes
Fornarino et al. 2009 publication 35 full sequences haplotypes Three sequences are incomplete.
Fraumene et al. 2006 publication 63 full sequences haplotypes
Fregel et al. 2009 publication 6 Not yet available in GenBank on 1 Nov 2009; accessions: FJ719302-FJ719307.
Friedlaender et al. 2005 publication 3 full sequences haplotypes
Friedlaender et al. 2007 publication 16 full sequences haplotypes
Gasparre et al. 2007 publication 102 full sequences haplotypes 28 sequences are incomplete and many sequences contain errors.
Gilbert et al. 2008 publication 15 full sequences haplotypes
Gonder et al. 2006 publication 62 full sequences haplotypes Sequences contain errors.
Gonzalez et al. 2006 publication 5 full sequences haplotypes
Gonzalez et al. 2007 publication 8 full sequences haplotypes
Hartmann et al. 2008 publication 95 full sequences haplotypes
Herrnstadt et al. 2002 publication 560 full sequences haplotypes Coding region only (pos. 577-16023). Several sequences were corrected according to Herrnstadt et al. 2003.
Hill et al. 2006 publication 11 full sequences haplotypes
Hinttala et al. 2006 publication 28 full sequences haplotypes Coding region only (pos. 523-16090).
Horai et al. 1995 publication 1 full sequence haplotype
Horváth et al. 2008 publication 1 full sequence haplotype Not available in GenBank: sequence was inferred from haplotype.
Howell et al. 2003 publication 65 full sequences haplotypes Not available in GenBank: sequences were inferred from haplotypes; only single-base-pair mutations were reported hence the sequences might be inaccurate with respect to insertions/deletions.
Howell et al. 2004 publication 93 full sequences haplotypes Not available in GenBank: sequences were obtained from article's supplementary material.
Hudjashov et al. 2007 publication 9 full sequences haplotypes
Ingman et al. 2000 publication 53 full sequences haplotypes
Ingman and Gyllensten 2003 publication 52 full sequences haplotypes
Ingman and Gyllensten 2007a publication 18 full sequences haplotypes
Ingman and Gyllensten 2007b publication 61 full sequences haplotypes
Janssen et al. 2006 publication 1 full sequence haplotype
Ji et al. 2008 publication 15 full sequences haplotypes
Just et al. 2008 publication 265 full sequences haplotypes
Kazuno et al. 2005 publication 57 full sequences haplotypes
Kivisild et al. 2006 publication 277 full sequences haplotypes Coding region only (pos. 436-16021).
Kong et al. 2003 publication 48 full sequences haplotypes
Kong et al. 2006 publication 20 full sequences haplotypes
Kornblum et al. 2008 publication 1 full sequence haplotype
Kujanová et al. 2009 publication 35 full sequences haplotypes
Kumar et al. 2008 publication 72 full sequences haplotypes
Kumar et al. 2009 publication 7 full sequences haplotypes
La Morgia et al. 2008 publication 2 full sequences haplotypes
Labay et al. 2008 publication 2 full sequences haplotypes Not available in GenBank: sequences were inferred from haplotypes.
Levin et al. 1999 publication 3 full sequences haplotypes
Li 2006 5 full sequences haplotypes
Maasz et al. 2008 publication 1 full sequence haplotype
Maca-Meyer et al. 2001 publication 33 full sequences haplotypes
Maca-Meyer et al. 2003 publication 11 full sequences haplotypes
Macaulay et al. 2005 publication 14 full sequences haplotypes
Malyarchuk et al. 2005 2 full sequences haplotypes
Malyarchuk et al. 2006 publication 1 full sequence haplotype Not available in GenBank: sequence was inferred from haplotype.
Malyarchuk et al. 2008a publication 73 full sequences haplotypes
Malyarchuk et al. 2008b publication 8 full sequences haplotypes
Malyarchuk et al. 2008c publication 5 full sequences haplotypes
Malyarchuk et al. 2008d publication 1 full sequence haplotype
Malyarchuk et al. 2009 5 full sequences haplotypes
McMahon et al. 2000 publication 9 full sequences haplotypes Not available in GenBank: sequences were inferred from haplotypes
Merriwether et al. 2005 publication 14 full sequences haplotypes
Mishmar et al. 2003 publication 48 full sequences haplotypes
Montiel-Sosa et al. 2006 publication 7 full sequences haplotypes
Noer et al. 2007 2 full sequences haplotypes
Nohira et al. 2009 publication 14 full sequences haplotypes
Olivieri et al. 2006 publication 78 full sequences haplotypes
Pala et al. 2009 publication 41 full sequences haplotypes
Palanichamy et al. 2004 publication 75 full sequences haplotypes
Palanichamy et al. 2006 publication 1 full sequence haplotype Not available in GenBank: sequence was inferred from haplotype
Pello et al. 2008 publication 10 full sequences haplotypes
Perego et al. 2009 publication 55 full sequences haplotypes
Pereira et al. 2007 publication 43 full sequences haplotypes
Phan et al. 2006a 1 full sequences haplotypes
Phan et al. 2006b 9 full sequences haplotypes
Pichler et al. 2008 publication 75 full sequences haplotypes
Pierson et al. 2006 publication 20 full sequences haplotypes
Quintana-Murci et al. 2008 publication 27 full sequences haplotypes
Rajkumar et al. 2005 publication 23 full sequences haplotypes Two sequences (accessions DQ246830 and DQ246833) are incomplete: pos. 1-250 are missing.
Razafindrazaka et al. 2009 3 full sequences haplotypes
Reidla et al. 2003 publication 5 full sequences haplotypes Not available in GenBank: sequences were inferred from haplotypes
Ricaut et al. 2009 5 full sequences haplotypes
Rogaev et al. 2009 publication 4 full sequences haplotypes
Roostalu et al. 2007 publication 15 full sequences haplotypes
Shin et al. 2001 1 full sequence haplotype
Shlush et al. 2008 publication 53 full sequences haplotypes
Soares et al. 2008 publication 50 full sequences haplotypes
Starikovskaya et al. 2005 publication 22 full sequences haplotypes
Sun et al. 2006 publication 56 full sequences haplotypes
Tabbada et al. 2009 publication 43 full sequences haplotypes
Tamm et al. 2007 publication 27 full sequences haplotypes
Tanaka et al. 2004 publication 672 full sequences haplotypes Several sequences identified as artificial recombinants were corrected according to Kong et al. 2008 but two recombinants (accessions AP008253 and AP008308) remain.
Thangaraj et al. 2005 publication 15 full sequences haplotypes
Thangaraj et al. 2006 publication 11 full sequences haplotypes
Thangaraj et al. 2009 publication 54 full sequences haplotypes
Torroni et al. 2006 publication 25 full sequences haplotypes
Trejaut et al. 2005 publication 8 full sequences haplotypes
Tuo et al. / Li 2006 1 full sequence haplotype
Ueno et al. 2009 publication 90 full sequences haplotypes
van Holst Pellekaan et al. 2006 publication 8 full sequences haplotypes
Volodko et al. 2008 publication 85 full sequences haplotypes
Wang et al. 2007 publication 29 full sequences haplotypes
Wang et al. 2008 publication 3 full sequences haplotypes
Wheeler et al. 2008 publication 1 full sequence haplotype Sequence was obtained by combining accessions ABKV01169335-36. Sequence is incomplete.
Yang et al. 2009a publication 1 full sequence haplotype
Yang et al. 2009b publication 2 full sequences haplotypes
Yang et al.  2009c publication 1 full sequence haplotype
Yao et al. 2008 publication 1 full sequence haplotype Sequence is incomplete.
Young et al. 2006 publication 3 full sequences haplotypes Not available in GenBank: sequences were inferred from haplotypes. Sequence BJ109 was identified as an artificial recombinant in Kong et al. 2008.
Zhang et al. 2008 publication 1 full sequence haplotype
Zhang et al. 2009 publication 1 full sequence haplotype
Zsurka et al. 2004 publication 1 full sequence haplotype
Zsurka et al. 2007 publication 2 full sequences haplotypes  
Total: 6747